Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs79416231 chr6:151418439 A/G 0 118 38.13 55 4.13 KM Plot
THYM rs79430229 chr4:70053125 G/A 7.82E-13 117 39.75 42.3 6 KM Plot
THYM rs79433062 chr4:76399795 A/C 1.26E-5 116 38.58 40.67 60.13 KM Plot
THYM rs7944734 chr11:125584653 T/A 0.000188 119 44.38 35.67 23.42 KM Plot
THYM rs7945007 chr11:16494570 A/G 8.69E-9 119 40.67 52.22 7.15 KM Plot
THYM rs7950287 chr11:16492118 G/T 8.69E-9 119 40.67 52.22 7.15 KM Plot
THYM rs79547173 chr2:30808647 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs79570261 chr4:115545471 A/G 0 119 38.23 52.95 4.13 KM Plot
THYM rs79599555 chr4:70065668 A/G 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs79611937 chr2:10966963 C/T 0.000197 119 41.77 38.58 62.72 KM Plot
THYM rs79652020 chr4:70067472 T/A 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs79690581 chr11:20026110 G/C 3.89E-6 116 42.82 25.4 13.75 KM Plot
THYM rs7972598 chr12:86947891 G/A 0 119 38.13 59.63 4.13 KM Plot
THYM rs79735814 chr4:70041541 G/T 7.82E-13 117 39.75 42.3 6 KM Plot
THYM rs7978162 chr12:4794733 A/G 4.4E-6 119 25.83 49.4 38.83 KM Plot